The "Dead City" of Cajamarquilla is located in today's district of San Juan de Lurigancho (close to the Parque Zoologico Huachipa in Ate-Vitarte). On the remains of an earlier settlement, the Wari built this archaeological complex around 500 AD. Cajamarquilla developed to the major commercial, administrative and military center with a population of about 15,000 people.

One of the first big settlements and ceremonial centers in the area of today's Lima was El Paraíso (The Paradise). For decades, the complex was dated to around 2200 BC, however, new findings suggest that it might be even 1000 or 2000 years older.

Puruchuco (meaning‚ Feather hat in Quecha) is located on km 4.5 of the Carretera Central east out of Lima in today's district of Ate. In the sprawling shantytown called Tupac Amaru lies the pre-Hispanic site, known to archaeologists as Puruchuco-Huaquerones that once was a main ceremonial center of the Incas. During archaeological investigations the archaeologist Guillermo Cock discovered the extent of the hidden settlement.